A New Era of Compliance, Transparency, and Digital Governance
As India embarks on the financial year 2025-26, the Goods and Services Tax (GST) framework is set to undergo substantial changes that will redefine compliance, enhance tax transparency, and strengthen regulatory oversight. These amendments, notified under the CGST Act, 2017, signal a shift towards digitization, stricter compliance deadlines, and improved ITC reconciliation mechanisms. Businesses must align their internal processes with these evolving regulatory requirements to ensure seamless operations and avoid potential penalties.
This advisory provides an in-depth analysis of these key changes, the underlying intent behind the reforms, and strategic considerations for businesses.
Cessation of Anti-Profiteering Provisions and Transition to GST Appellate Tribunal (GSTAT)
One of the most significant regulatory changes is the sunset of anti-profiteering provisions under GST, pursuant to Notification No. 19/2024 – Central Tax. With effect from April 1, 2025, anti-profiteering cases will no longer be handled by the National Anti-Profiteering Authority (NAA). Instead, they will be adjudicated by the Principal Bench of the GST Appellate Tribunal (GSTAT).
The intent behind this transition is to introduce a structured legal process for addressing profiteering disputes, ensuring that businesses have access to an established appellate mechanism. The shift from the NAA to GSTAT eliminates ad-hoc interpretations and aligns anti-profiteering matters with standard judicial practices. Businesses involved in pricing disputes should re-evaluate their past cases and prepare for GSTAT’s legal scrutiny to avoid litigation risks.
Mandatory 30-Day E-Invoice Reporting for Businesses with AATO Exceeding ₹10 Crores
To curb tax evasion and strengthen input tax credit (ITC) reconciliation, the government has expanded the mandatory e-invoice reporting timeline. Previously applicable to businesses with an Annual Aggregate Turnover (AATO) of ₹100 crores or more, the compliance threshold has now been lowered to ₹10 crores. From April 1, 2025, businesses exceeding this turnover threshold must report e-invoices within 30 days from the invoice date.
This change aims to prevent fraudulent ITC claims arising from delayed invoice reporting and ensure real-time reconciliation of input credits. The transition will necessitate automation of invoice processing systems to meet reporting deadlines. Businesses should upgrade their ERP/accounting software and implement real-time invoicing solutions to prevent non-compliance.
Enhancements to GSTR-7 and GSTR-8 for Strengthened Compliance
To improve tax traceability and streamline tax deduction at source (TDS) and tax collection at source (TCS) processes, the government has introduced critical enhancements to Forms GSTR-7 and GSTR-8.
For GSTR-7 (TDS Return), a new column has been inserted in Tables 3 and 4 to capture invoice/document-wise details of tax deducted. Additionally, clarifications have been provided regarding TDS calculations, stipulating that the taxable amount should exclude CGST, SGST, IGST, and Cess.
Similarly, GSTR-8 (TCS Return) will now include a Place of Supply (POS) field in Tables 3 and 4 to facilitate better jurisdictional tracking of TCS transactions. These modifications will improve ITC reconciliation for buyers and sellers, ensuring accurate tax credit claims. Businesses should update their accounting systems to accommodate these changes and conduct training sessions for compliance teams to avoid errors in return filing.
Implementation of Multi-Factor Authentication (MFA) for E-Invoice and E-Way Bill Portals
In a move aimed at enhancing digital security and preventing unauthorized access, the government has mandated Multi-Factor Authentication (MFA) for all taxpayers using the e-invoice and e-way bill portals. With effect from April 1, 2025, businesses will be required to verify their identity through OTP-based authentication in addition to their existing login credentials.
This initiative is designed to mitigate cybersecurity threats and protect taxpayer data from fraudulent access. Businesses must ensure that their registered mobile numbers are up to date, as OTPs will be sent to the taxpayer’s verified contact details. Furthermore, organizations should implement internal controls and educate employees on secure login procedures to avoid disruptions in e-invoice and e-way bill generation.
Restriction on GST Return Filing Beyond Three Years
A significant procedural amendment will be introduced to restrict the filing of GST returns beyond three years from their due date. Under this provision, taxpayers will no longer be able to file GSTR-1, GSTR-3B, GSTR-4, GSTR-5, GSTR-6, GSTR-7, GSTR-8, and GSTR-9 after the expiry of three years. This change, introduced under the Finance Act, 2023, aims to promote timely compliance and prevent retrospective adjustments to past tax periods.
Businesses must take immediate action to review and file any pending returns before the new restrictions take effect. Additionally, organizations should implement a compliance tracking system to ensure timely filing and avoid missing statutory deadlines.
Biometric-Based Aadhaar Authentication for GST Registration
To curb fraudulent GST registrations and strengthen taxpayer verification, the government has made biometric-based Aadhaar authentication mandatory for new GST registrations. Promoters and partners opting for Aadhaar authentication must visit a GST Suvidha Kendra (GSK) for biometric verification and document validation. The Primary Authorized Signatory (PAS) must also complete document verification within 15 days of submitting Part B of Form REG-01, failing which the Application Reference Number (ARN) will not be generated.
This measure is expected to reduce fake registrations and enhance the credibility of GST-registered businesses. Organizations applying for GST registration should ensure that all required documents are in order and promptly complete biometric verification to avoid delays in approval.
Mandatory Real-Time Invoice Matching with the Invoice Management System (IMS)
The Invoice Management System (IMS), introduced on October 1, 2024, will become mandatory for ITC reconciliation. This system allows businesses to view, accept, reject, or keep invoices pending before finalizing ITC claims. If no action is taken, invoices will be auto-accepted and reflected in GSTR-2B.
By enforcing real-time invoice validation, IMS aims to reduce discrepancies in ITC claims, eliminate fraudulent credits, and enhance tax compliance. The system will also prevent erroneous rejection of invoices by enabling businesses to re-accept mistakenly rejected invoices before filing GSTR-3B. Businesses must prepare for this shift by implementing automated invoice reconciliation solutions and ensuring strict vendor compliance with GSTR-1 reporting.
Conclusion
The upcoming GST reforms reflect the government’s commitment to improving compliance, transparency, and digital governance. From automated invoice matching and stricter return filing deadlines to multi-factor authentication and biometric-based verification, businesses must embrace these changes proactively.
To navigate these reforms successfully, organizations should:
- Enhance digital readiness by upgrading ERP/accounting software for automated e-invoicing and ITC reconciliation.
- Ensure compliance with revised reporting timelines to prevent penalties and disruptions.
- Educate finance and compliance teams on new procedural requirements for seamless adaptation.
As the financial year 2025-26 commences, businesses that prioritize early compliance and digital transformation will not only avoid regulatory risks but also enhance their operational efficiency. Proactive alignment with these GST changes will be instrumental in ensuring a smooth transition into the new compliance landscape.
For businesses seeking expert guidance, consulting a tax advisor or GST consultant is highly recommended to strategize compliance measures effectively and mitigate risks arising from non-adherence.